dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01074
Location and strand information: 402 - 3266 (+)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3974
Protein molecular weight: 103075.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01075
Location and strand information: 3330 - 4127 (+)
Family: CE12
Protein type: CAZyme
Protein description: putative rhamnogalacturonan acetylesterase YesY
Protein isoelectric point: 8.4586
Protein molecular weight: 29446.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01076
Location and strand information: 4208 - 7186 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.8391
Protein molecular weight: 112222.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01077
Location and strand information: 7199 - 10009 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9118
Protein molecular weight: 105239.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01078
Location and strand information: 10225 - 11706 (+)
Family: null
Protein type: null
Protein description: L-Rhamnulokinase

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01079
Location and strand information: 11736 - 12986 (+)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01080
Location and strand information: 13063 - 14100 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01081
Location and strand information: 14133 - 14942 (+)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01082
Location and strand information: 14971 - 16284 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4348
Protein molecular weight: 50237.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01083
Location and strand information: 16363 - 17796 (+)
Family: GH28|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6808
Protein molecular weight: 52779.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01084
Location and strand information: 18180 - 20327 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01085
Location and strand information: 20390 - 22822 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01086
Location and strand information: 22846 - 26145 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01087
Location and strand information: 26158 - 27696 (+)
Family: 8.A.46.1.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01088
Location and strand information: 27716 - 29371 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01089
Location and strand information: 29377 - 31176 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000415_4|CGC1
Gene ID: MGYG000000415_01090
Location and strand information: 31197 - 34328 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000415_01074	PL1_e62
MGYG000000415_01075	CE12_e25
MGYG000000415_01076	GH2_e89\|3.2.1.23	beta-galactan
MGYG000000415_01077	GH106_e0\|3.2.1.174	pectin
MGYG000000415_01082	GH105_e39
MGYG000000415_01083	GH28_e38\|GH105_e32\|3.2.1.67	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000415_01074	hypothetical protein	CAZyme	402	3266	+	PL1\| PL1_2
MGYG000000415_01075	putative rhamnogalacturonan acetylesterase YesY	CAZyme	3330	4127	+	CE12
MGYG000000415_01076	Beta-galactosidase	CAZyme	4208	7186	+	GH2
MGYG000000415_01077	hypothetical protein	CAZyme	7199	10009	+	GH106
MGYG000000415_01078	L-Rhamnulokinase	null	10225	11706	+	FGGY_N\| FGGY_C
MGYG000000415_01079	L-rhamnose isomerase	null	11736	12986	+	RhaA
MGYG000000415_01080	L-rhamnose-proton symporter	TC	13063	14100	+	2.A.7.6.1
MGYG000000415_01081	Rhamnulose-1-phosphate aldolase	null	14133	14942	+	Aldolase_II
MGYG000000415_01082	hypothetical protein	CAZyme	14971	16284	+	GH105
MGYG000000415_01083	hypothetical protein	CAZyme	16363	17796	+	GH28\| GH105
MGYG000000415_01084	hypothetical protein	null	18180	20327	+	No domain
MGYG000000415_01085	hypothetical protein	null	20390	22822	+	Fasciclin
MGYG000000415_01086	TonB-dependent receptor SusC	TC	22846	26145	+	1.B.14.6.1
MGYG000000415_01087	hypothetical protein	TC	26158	27696	+	8.A.46.1.4
MGYG000000415_01088	hypothetical protein	null	27716	29371	+	Fasciclin\| Fasciclin
MGYG000000415_01089	hypothetical protein	null	29377	31176	+	Fasciclin
MGYG000000415_01090	hypothetical protein	TC	31197	34328	+	1.B.14.6.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature